outcome_columns <- list(
"date" = "date",
"outcome" = "daily_deaths",
"geo_unit" = "TOWN20",
"geo_unit_grp" = "COUNTY20",
"factor" = "age_grp"
)
ma_outcomes_tbl_fct <- make_outcome_table(
ma_deaths, outcome_columns,
time_subset = list(
month = 5:9,
year = 2012:2015
))
#> > Combined factor is age_grp
#> Missing outcome values introduced by xgrid were set to 0;
#> assumes that every time in the dataset should have an outcome value
#> strata dt_by = 'day', setting strata as geo_unit:yr:mn:dow
head(ma_outcomes_tbl_fct)
#> date TOWN20 COUNTY20 age_grp daily_deaths strata
#> <IDat> <char> <char> <char> <int> <char>
#> 1: 2012-05-01 ABINGTON PLYMOUTH 0-17 20 ABINGTON:yr2012:mn05:dow03
#> 2: 2012-05-01 ABINGTON PLYMOUTH 18-64 20 ABINGTON:yr2012:mn05:dow03
#> 3: 2012-05-01 ABINGTON PLYMOUTH 65+ 20 ABINGTON:yr2012:mn05:dow03
#> 4: 2012-05-02 ABINGTON PLYMOUTH 0-17 20 ABINGTON:yr2012:mn05:dow04
#> 5: 2012-05-02 ABINGTON PLYMOUTH 18-64 20 ABINGTON:yr2012:mn05:dow04
#> 6: 2012-05-02 ABINGTON PLYMOUTH 65+ 20 ABINGTON:yr2012:mn05:dow04
#> strata_total match_strata
#> <int> <char>
#> 1: 112 ABINGTON:2012-05-01
#> 2: 102 ABINGTON:2012-05-01
#> 3: 107 ABINGTON:2012-05-01
#> 4: 116 ABINGTON:2012-05-02
#> 5: 105 ABINGTON:2012-05-02
#> 6: 113 ABINGTON:2012-05-02
outcome_columns <- list(
"date" = "date",
"outcome" = "daily_deaths",
"geo_unit" = "TOWN20",
"geo_unit_grp" = "COUNTY20",
"factor" = c("age_grp", 'sex')
)
ma_outcomes_tbl_fct <- make_outcome_table(
ma_deaths, outcome_columns,
time_subset = list(
month = 5:9,
year = 2012:2015
))
#> > Combined factor is age_grp|sex
#> Missing outcome values introduced by xgrid were set to 0;
#> assumes that every time in the dataset should have an outcome value
#> strata dt_by = 'day', setting strata as geo_unit:yr:mn:dow
head(ma_outcomes_tbl_fct)
#> date TOWN20 COUNTY20 age_grp|sex daily_deaths
#> <IDat> <char> <char> <char> <int>
#> 1: 2012-05-01 ABINGTON PLYMOUTH 0-17|M 10
#> 2: 2012-05-01 ABINGTON PLYMOUTH 18-64|M 10
#> 3: 2012-05-01 ABINGTON PLYMOUTH 65+|M 10
#> 4: 2012-05-01 ABINGTON PLYMOUTH 0-17|F 10
#> 5: 2012-05-01 ABINGTON PLYMOUTH 18-64|F 10
#> 6: 2012-05-01 ABINGTON PLYMOUTH 65+|F 10
#> strata strata_total match_strata
#> <char> <int> <char>
#> 1: ABINGTON:yr2012:mn05:dow03 55 ABINGTON:2012-05-01
#> 2: ABINGTON:yr2012:mn05:dow03 52 ABINGTON:2012-05-01
#> 3: ABINGTON:yr2012:mn05:dow03 53 ABINGTON:2012-05-01
#> 4: ABINGTON:yr2012:mn05:dow03 57 ABINGTON:2012-05-01
#> 5: ABINGTON:yr2012:mn05:dow03 50 ABINGTON:2012-05-01
#> 6: ABINGTON:yr2012:mn05:dow03 54 ABINGTON:2012-05-01